BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C02SP1|AL429703
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1104 1654 0.0
>3x_Contig1104
Length = 4895
Score = 1654 bits (831), Expect = 0.0
Identities = 839/845 (99%)
Strand = Plus / Minus
Query: 3 gagaaaagtaaggaacacgcccaagccaaaggtagagaggctgctgccaagggtaaggaa 62
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 gagaaaggtaaggaacacgcccaagccaaaggtagagaggctgctgccaagggtaaggaa 3902
Query: 63 gccgctgccaagggtaaagaaaaactggaaaatgctgctgacaaactaaacgaataaaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 gccgctgccaagggtaaagaaaaactggaaaatgctgctgacaaactaaacgaataaaaa 3842
Query: 123 taaggaatgagatgatgataaagtccggaatgtcgatgtcctcttttcccaataaaccaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 taaggaatgagatgatgataaagtccggaatgtcgatgtcctcttttcccaataaaccaa 3782
Query: 183 attacctgatcctttaagcagcagggtgacaataaacgcccttgtgctaatattctagca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 attacctgatcctttaagcagcagggtgacaataaacgcccttgtgctaatattctagca 3722
Query: 243 ttccaaatgccgtatctggggttcgagcaatggaataataaatgtgtagtaaccacaaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 ttccaaatgccgtatctggggttcgagcaatggaataataaatgtgtagtaaccacaaat 3662
Query: 303 acatatatmacgtgaaacaagagaaaaatacaacgtaattcttcttaatacttagtctga 362
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 acatatataacgtgaaacaagagaaaaatacaacgtaattcttcttaatacttagtctga 3602
Query: 363 vactttctgaagctatcacatctttaacttagcatttgtgacccgccatattcaattctt 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 aactttctgaagctatcacatctttaacttagcatttgtgacccgccatattcaattctt 3542
Query: 423 gtccatcaccatgtaatcactgttgattctgtaatagatggtctaccgaggttgaatccg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 gtccatcaccatgtaatcactgttgattctgtaatagatggtctaccgaggttgaatccg 3482
Query: 483 ccagttcttcagaagtattcgatttctcagattcaacaggtacgccatttttccttttct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 ccagttcttcagaagtattcgatttctcagattcaacaggtacgccatttttccttttct 3422
Query: 543 taatcaactcaagatagttgtatggracgtacccaatatttccttgttttgttctgactt 602
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3421 taatcaactcaagatagttgtatggaacgtacccaatatttccttgttttgttctgactt 3362
Query: 603 tccaccattcagagttatttcctagtggatctttcttggaaatgattgccattagatctc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 tccaccattcagagttatttcctagtggatctttcttggaaatgattgccattagatctc 3302
Query: 663 ctttctttaagttacattcaattcttggattctcaggaacgaratcatagatcgctcttg 722
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3301 ctttctttaagttacattcaattcttggattctcaggaacgaaatcatagatcgctcttg 3242
Query: 723 caaattctaggttattaggatctaagatttgttgtgccatagcgccgccagctattttgg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 caaattctaggttattaggatctaagatttgttgtgccatagcgccgccagctattttgg 3182
Query: 783 ctttttggtgctgttgtaatttctgaataahtttgttcaaaaggtacgggaagccgaaca 842
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3181 ctttttggtgctgttgtaatttctgaataaatttgttcaaaaggtacgggaagccgaaca 3122
Query: 843 cagct 847
|||||
Sbjct: 3121 cagct 3117
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6695
Number of Sequences: 1807
Number of extensions: 6695
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)